clinicadl.io.bids.FlairLinear¶

class clinicadl.io.bids.FlairLinear(use_uncropped_image: bool = False)[source]¶

BidsFileType to select Fluid-Attenuated Inversion Recovery (FLAIR) MRI images preprocessed with Clinica flair-linear pipeline.

Parameters:

use_uncropped_image (bool, default=False) –

Whether to use the uncropped images returned by Clinica:

if use_uncropped_image=True: only the files that match the pattern flair_linear/sub-*_ses-*_space-MNI152NLin2009cSym_res-1x1x1_FLAIR.nii* will be selected.
else: only the files that match the pattern flair_linear/sub-*_ses-*_space-MNI152NLin2009cSym_desc-Crop_res-1x1x1_FLAIR.nii* will be selected.